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File:Antimicrobial peptide size diversity.svg

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Summary

Description
English: Antimicrobial peptides (ribosomally synthesised) from vertebrate and invertebrate animals, plants and fungi organised by their secondary structure content. Circle size indicates overall molecular weight of each peptide. (PDB: 1MR4​; PDB: 1NB1​; PDB: 1IJV​; PDB: 2LXZ​; PDB: 2ATG​; PDB: 2RNG​; PDB: 2JS9​; PDB: 1G89​; PDB: 2K6O​; PDB: 2K35​; PDB: 2LN8​; PDB: 1BHP​; PDB: 3OTJ​; PDB: 1GD3​; PDB: 2LG4​; PDB: 1ED0​; PDB: 2L2R​; PDB: 1JBL​; PDB: 1HEV​; PDB: 2MAL​; PDB: 1DKC​; PDB: 1MYN​; PDB: 5E5Q​; PDB: 2MUH​; PDB: 8TFV​; PDB: 5OQS​)
Date
Source Own work
Author Thomas Shafee


Raw data
Name PDB length alpha beta
C8 defensin 1MR4 47 10 13
cyclotide 1NB1 29 0 9
β-defensin 1IJV 36 6 12
α-defensin 2LXZ 32 0 19
θ-defensin 2ATG 18 0 6
big defensin 2RNG 79 20 18
caenopore 2JS9 99 48 0
indolicidin 1G89 14 0 0
cathelicidin 2K6O 37 30 0
hydramacin 2K35 60 16 11
theromacin 2LN8 75 13 8
β-thionin 1BHP 45 17 6
kunitz inhibtor 3OTJ 58 12 15
cystatin 1GD3 98 17 24
aurelin 2LG4 40 14 0
α-thionin 1ED0 46 20 4
hairpinin 2L2R 37 20 0
cyclic BBI 1JBL 14 0 2
plant lectin 1HEV 43 13 5
lipid transfer protein 2MAL 93 55 0
knottin 1DKC 38 0 13
C6 defensin 1MYN 44 11 10
snakin 5E5Q 63 31 0
protegrin 2MUH 19 8 0
thanatin 8TFV 21 3 8
AFP 5OQS 57 0 23

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Captions

Antimicrobial peptides from animals, plants and fungi organised by their secondary structure content. Circle size indicates overall molecular weight of each peptide.

inception

1 October 2019

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image/svg+xml

checksum

04be6595a37cb2c28391c9dc0f596149a582dcd3

determination method: SHA-1

data size

52,694 byte

height

1,055 pixel

width

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Date/TimeThumbnailDimensionsUserComment
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